Max Planck Institute for Molecular Genetics
Department of Computational Molecular Biology
I. G. Costa, A. Schönhuth, and A. Schliep
Bioinformatics 2005, Vol. 21, Number 10, Pages 2544-5
The Graphical Query Language (GQL) is a set of tools for the analysis of gene expression time-courses. They allow a user to pre-process the data, to query it for interesting patterns, to perform model-based clustering or mixture estimation, to include subsequent refinements of clusters and, finally, to use other biological resources to evaluate the results. Analyses are carried out in a graphical and interactive environment, allowing expert intervention in all stages of the data analysis. AVAILABILITY: The GQL package is freely available under the GNU general public license (GPL) at http://www.ghmm.org/gql
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